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<?php
/*
* Copyright 2014 Google Inc.
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not
* use this file except in compliance with the License. You may obtain a copy of
* the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations under
* the License.
*/
/**
* Service definition for Genomics (v1).
*
* <p>
* Upload, process, query, and search Genomics data in the cloud.</p>
*
* <p>
* For more information about this service, see the API
* <a href="https://cloud.google.com/genomics" target="_blank">Documentation</a>
* </p>
*
* @author Google, Inc.
*/
class Google_Service_Genomics extends Google_Service
{
/** View and manage your data in Google BigQuery. */
const BIGQUERY =
"https://www.googleapis.com/auth/bigquery";
/** View and manage your data across Google Cloud Platform services. */
const CLOUD_PLATFORM =
"https://www.googleapis.com/auth/cloud-platform";
/** Manage your data in Google Cloud Storage. */
const DEVSTORAGE_READ_WRITE =
"https://www.googleapis.com/auth/devstorage.read_write";
/** View and manage Genomics data. */
const GENOMICS =
"https://www.googleapis.com/auth/genomics";
/** View Genomics data. */
const GENOMICS_READONLY =
"https://www.googleapis.com/auth/genomics.readonly";
public $annotations;
public $annotationsets;
public $callsets;
public $datasets;
public $operations;
public $readgroupsets;
public $readgroupsets_coveragebuckets;
public $reads;
public $references;
public $references_bases;
public $referencesets;
public $variants;
public $variantsets;
/**
* Constructs the internal representation of the Genomics service.
*
* @param Google_Client $client
*/
public function __construct(Google_Client $client)
{
parent::__construct($client);
$this->rootUrl = 'https://genomics.googleapis.com/';
$this->servicePath = '';
$this->version = 'v1';
$this->serviceName = 'genomics';
$this->annotations = new Google_Service_Genomics_Resource_Annotations(
$this,
$this->serviceName,
'annotations',
array(
'methods' => array(
'batchCreate' => array(
'path' => 'v1/annotations:batchCreate',
'httpMethod' => 'POST',
'parameters' => array(),
),'create' => array(
'path' => 'v1/annotations',
'httpMethod' => 'POST',
'parameters' => array(),
),'delete' => array(
'path' => 'v1/annotations/{annotationId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'annotationId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/annotations/{annotationId}',
'httpMethod' => 'GET',
'parameters' => array(
'annotationId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'search' => array(
'path' => 'v1/annotations/search',
'httpMethod' => 'POST',
'parameters' => array(),
),'update' => array(
'path' => 'v1/annotations/{annotationId}',
'httpMethod' => 'PUT',
'parameters' => array(
'annotationId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),
)
)
);
$this->annotationsets = new Google_Service_Genomics_Resource_Annotationsets(
$this,
$this->serviceName,
'annotationsets',
array(
'methods' => array(
'create' => array(
'path' => 'v1/annotationsets',
'httpMethod' => 'POST',
'parameters' => array(),
),'delete' => array(
'path' => 'v1/annotationsets/{annotationSetId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'annotationSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/annotationsets/{annotationSetId}',
'httpMethod' => 'GET',
'parameters' => array(
'annotationSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'search' => array(
'path' => 'v1/annotationsets/search',
'httpMethod' => 'POST',
'parameters' => array(),
),'update' => array(
'path' => 'v1/annotationsets/{annotationSetId}',
'httpMethod' => 'PUT',
'parameters' => array(
'annotationSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),
)
)
);
$this->callsets = new Google_Service_Genomics_Resource_Callsets(
$this,
$this->serviceName,
'callsets',
array(
'methods' => array(
'create' => array(
'path' => 'v1/callsets',
'httpMethod' => 'POST',
'parameters' => array(),
),'delete' => array(
'path' => 'v1/callsets/{callSetId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'callSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/callsets/{callSetId}',
'httpMethod' => 'GET',
'parameters' => array(
'callSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'patch' => array(
'path' => 'v1/callsets/{callSetId}',
'httpMethod' => 'PATCH',
'parameters' => array(
'callSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),'search' => array(
'path' => 'v1/callsets/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
$this->datasets = new Google_Service_Genomics_Resource_Datasets(
$this,
$this->serviceName,
'datasets',
array(
'methods' => array(
'create' => array(
'path' => 'v1/datasets',
'httpMethod' => 'POST',
'parameters' => array(),
),'delete' => array(
'path' => 'v1/datasets/{datasetId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'datasetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/datasets/{datasetId}',
'httpMethod' => 'GET',
'parameters' => array(
'datasetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'getIamPolicy' => array(
'path' => 'v1/{+resource}:getIamPolicy',
'httpMethod' => 'POST',
'parameters' => array(
'resource' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'list' => array(
'path' => 'v1/datasets',
'httpMethod' => 'GET',
'parameters' => array(
'pageSize' => array(
'location' => 'query',
'type' => 'integer',
),
'projectId' => array(
'location' => 'query',
'type' => 'string',
),
'pageToken' => array(
'location' => 'query',
'type' => 'string',
),
),
),'patch' => array(
'path' => 'v1/datasets/{datasetId}',
'httpMethod' => 'PATCH',
'parameters' => array(
'datasetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),'setIamPolicy' => array(
'path' => 'v1/{+resource}:setIamPolicy',
'httpMethod' => 'POST',
'parameters' => array(
'resource' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'testIamPermissions' => array(
'path' => 'v1/{+resource}:testIamPermissions',
'httpMethod' => 'POST',
'parameters' => array(
'resource' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'undelete' => array(
'path' => 'v1/datasets/{datasetId}:undelete',
'httpMethod' => 'POST',
'parameters' => array(
'datasetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),
)
)
);
$this->operations = new Google_Service_Genomics_Resource_Operations(
$this,
$this->serviceName,
'operations',
array(
'methods' => array(
'cancel' => array(
'path' => 'v1/{+name}:cancel',
'httpMethod' => 'POST',
'parameters' => array(
'name' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/{+name}',
'httpMethod' => 'GET',
'parameters' => array(
'name' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'list' => array(
'path' => 'v1/{+name}',
'httpMethod' => 'GET',
'parameters' => array(
'name' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'filter' => array(
'location' => 'query',
'type' => 'string',
),
'pageToken' => array(
'location' => 'query',
'type' => 'string',
),
'pageSize' => array(
'location' => 'query',
'type' => 'integer',
),
),
),
)
)
);
$this->readgroupsets = new Google_Service_Genomics_Resource_Readgroupsets(
$this,
$this->serviceName,
'readgroupsets',
array(
'methods' => array(
'delete' => array(
'path' => 'v1/readgroupsets/{readGroupSetId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'readGroupSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'export' => array(
'path' => 'v1/readgroupsets/{readGroupSetId}:export',
'httpMethod' => 'POST',
'parameters' => array(
'readGroupSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/readgroupsets/{readGroupSetId}',
'httpMethod' => 'GET',
'parameters' => array(
'readGroupSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'import' => array(
'path' => 'v1/readgroupsets:import',
'httpMethod' => 'POST',
'parameters' => array(),
),'patch' => array(
'path' => 'v1/readgroupsets/{readGroupSetId}',
'httpMethod' => 'PATCH',
'parameters' => array(
'readGroupSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),'search' => array(
'path' => 'v1/readgroupsets/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
$this->readgroupsets_coveragebuckets = new Google_Service_Genomics_Resource_ReadgroupsetsCoveragebuckets(
$this,
$this->serviceName,
'coveragebuckets',
array(
'methods' => array(
'list' => array(
'path' => 'v1/readgroupsets/{readGroupSetId}/coveragebuckets',
'httpMethod' => 'GET',
'parameters' => array(
'readGroupSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'targetBucketWidth' => array(
'location' => 'query',
'type' => 'string',
),
'referenceName' => array(
'location' => 'query',
'type' => 'string',
),
'end' => array(
'location' => 'query',
'type' => 'string',
),
'pageToken' => array(
'location' => 'query',
'type' => 'string',
),
'pageSize' => array(
'location' => 'query',
'type' => 'integer',
),
'start' => array(
'location' => 'query',
'type' => 'string',
),
),
),
)
)
);
$this->reads = new Google_Service_Genomics_Resource_Reads(
$this,
$this->serviceName,
'reads',
array(
'methods' => array(
'search' => array(
'path' => 'v1/reads/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
$this->references = new Google_Service_Genomics_Resource_References(
$this,
$this->serviceName,
'references',
array(
'methods' => array(
'get' => array(
'path' => 'v1/references/{referenceId}',
'httpMethod' => 'GET',
'parameters' => array(
'referenceId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'search' => array(
'path' => 'v1/references/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
$this->references_bases = new Google_Service_Genomics_Resource_ReferencesBases(
$this,
$this->serviceName,
'bases',
array(
'methods' => array(
'list' => array(
'path' => 'v1/references/{referenceId}/bases',
'httpMethod' => 'GET',
'parameters' => array(
'referenceId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'end' => array(
'location' => 'query',
'type' => 'string',
),
'pageToken' => array(
'location' => 'query',
'type' => 'string',
),
'pageSize' => array(
'location' => 'query',
'type' => 'integer',
),
'start' => array(
'location' => 'query',
'type' => 'string',
),
),
),
)
)
);
$this->referencesets = new Google_Service_Genomics_Resource_Referencesets(
$this,
$this->serviceName,
'referencesets',
array(
'methods' => array(
'get' => array(
'path' => 'v1/referencesets/{referenceSetId}',
'httpMethod' => 'GET',
'parameters' => array(
'referenceSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'search' => array(
'path' => 'v1/referencesets/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
$this->variants = new Google_Service_Genomics_Resource_Variants(
$this,
$this->serviceName,
'variants',
array(
'methods' => array(
'create' => array(
'path' => 'v1/variants',
'httpMethod' => 'POST',
'parameters' => array(),
),'delete' => array(
'path' => 'v1/variants/{variantId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'variantId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/variants/{variantId}',
'httpMethod' => 'GET',
'parameters' => array(
'variantId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'import' => array(
'path' => 'v1/variants:import',
'httpMethod' => 'POST',
'parameters' => array(),
),'merge' => array(
'path' => 'v1/variants:merge',
'httpMethod' => 'POST',
'parameters' => array(),
),'patch' => array(
'path' => 'v1/variants/{variantId}',
'httpMethod' => 'PATCH',
'parameters' => array(
'variantId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),'search' => array(
'path' => 'v1/variants/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
$this->variantsets = new Google_Service_Genomics_Resource_Variantsets(
$this,
$this->serviceName,
'variantsets',
array(
'methods' => array(
'create' => array(
'path' => 'v1/variantsets',
'httpMethod' => 'POST',
'parameters' => array(),
),'delete' => array(
'path' => 'v1/variantsets/{variantSetId}',
'httpMethod' => 'DELETE',
'parameters' => array(
'variantSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'export' => array(
'path' => 'v1/variantsets/{variantSetId}:export',
'httpMethod' => 'POST',
'parameters' => array(
'variantSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'get' => array(
'path' => 'v1/variantsets/{variantSetId}',
'httpMethod' => 'GET',
'parameters' => array(
'variantSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
),
),'patch' => array(
'path' => 'v1/variantsets/{variantSetId}',
'httpMethod' => 'PATCH',
'parameters' => array(
'variantSetId' => array(
'location' => 'path',
'type' => 'string',
'required' => true,
),
'updateMask' => array(
'location' => 'query',
'type' => 'string',
),
),
),'search' => array(
'path' => 'v1/variantsets/search',
'httpMethod' => 'POST',
'parameters' => array(),
),
)
)
);
}
}