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<?php /* * Copyright 2014 Google Inc. * * Licensed under the Apache License, Version 2.0 (the "License"); you may not * use this file except in compliance with the License. You may obtain a copy of * the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, WITHOUT * WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the * License for the specific language governing permissions and limitations under * the License. */ /** * Service definition for Genomics (v1). * * <p> * Upload, process, query, and search Genomics data in the cloud.</p> * * <p> * For more information about this service, see the API * <a href="https://cloud.google.com/genomics" target="_blank">Documentation</a> * </p> * * @author Google, Inc. */ class Google_Service_Genomics extends Google_Service { /** View and manage your data in Google BigQuery. */ const BIGQUERY = "https://www.googleapis.com/auth/bigquery"; /** View and manage your data across Google Cloud Platform services. */ const CLOUD_PLATFORM = "https://www.googleapis.com/auth/cloud-platform"; /** Manage your data in Google Cloud Storage. */ const DEVSTORAGE_READ_WRITE = "https://www.googleapis.com/auth/devstorage.read_write"; /** View and manage Genomics data. */ const GENOMICS = "https://www.googleapis.com/auth/genomics"; /** View Genomics data. */ const GENOMICS_READONLY = "https://www.googleapis.com/auth/genomics.readonly"; public $annotations; public $annotationsets; public $callsets; public $datasets; public $operations; public $readgroupsets; public $readgroupsets_coveragebuckets; public $reads; public $references; public $references_bases; public $referencesets; public $variants; public $variantsets; /** * Constructs the internal representation of the Genomics service. * * @param Google_Client $client */ public function __construct(Google_Client $client) { parent::__construct($client); $this->rootUrl = 'https://genomics.googleapis.com/'; $this->servicePath = ''; $this->version = 'v1'; $this->serviceName = 'genomics'; $this->annotations = new Google_Service_Genomics_Resource_Annotations( $this, $this->serviceName, 'annotations', array( 'methods' => array( 'batchCreate' => array( 'path' => 'v1/annotations:batchCreate', 'httpMethod' => 'POST', 'parameters' => array(), ),'create' => array( 'path' => 'v1/annotations', 'httpMethod' => 'POST', 'parameters' => array(), ),'delete' => array( 'path' => 'v1/annotations/{annotationId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'annotationId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/annotations/{annotationId}', 'httpMethod' => 'GET', 'parameters' => array( 'annotationId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'search' => array( 'path' => 'v1/annotations/search', 'httpMethod' => 'POST', 'parameters' => array(), ),'update' => array( 'path' => 'v1/annotations/{annotationId}', 'httpMethod' => 'PUT', 'parameters' => array( 'annotationId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ), ) ) ); $this->annotationsets = new Google_Service_Genomics_Resource_Annotationsets( $this, $this->serviceName, 'annotationsets', array( 'methods' => array( 'create' => array( 'path' => 'v1/annotationsets', 'httpMethod' => 'POST', 'parameters' => array(), ),'delete' => array( 'path' => 'v1/annotationsets/{annotationSetId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'annotationSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/annotationsets/{annotationSetId}', 'httpMethod' => 'GET', 'parameters' => array( 'annotationSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'search' => array( 'path' => 'v1/annotationsets/search', 'httpMethod' => 'POST', 'parameters' => array(), ),'update' => array( 'path' => 'v1/annotationsets/{annotationSetId}', 'httpMethod' => 'PUT', 'parameters' => array( 'annotationSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ), ) ) ); $this->callsets = new Google_Service_Genomics_Resource_Callsets( $this, $this->serviceName, 'callsets', array( 'methods' => array( 'create' => array( 'path' => 'v1/callsets', 'httpMethod' => 'POST', 'parameters' => array(), ),'delete' => array( 'path' => 'v1/callsets/{callSetId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'callSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/callsets/{callSetId}', 'httpMethod' => 'GET', 'parameters' => array( 'callSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'patch' => array( 'path' => 'v1/callsets/{callSetId}', 'httpMethod' => 'PATCH', 'parameters' => array( 'callSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ),'search' => array( 'path' => 'v1/callsets/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); $this->datasets = new Google_Service_Genomics_Resource_Datasets( $this, $this->serviceName, 'datasets', array( 'methods' => array( 'create' => array( 'path' => 'v1/datasets', 'httpMethod' => 'POST', 'parameters' => array(), ),'delete' => array( 'path' => 'v1/datasets/{datasetId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'datasetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/datasets/{datasetId}', 'httpMethod' => 'GET', 'parameters' => array( 'datasetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'getIamPolicy' => array( 'path' => 'v1/{+resource}:getIamPolicy', 'httpMethod' => 'POST', 'parameters' => array( 'resource' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'list' => array( 'path' => 'v1/datasets', 'httpMethod' => 'GET', 'parameters' => array( 'pageSize' => array( 'location' => 'query', 'type' => 'integer', ), 'projectId' => array( 'location' => 'query', 'type' => 'string', ), 'pageToken' => array( 'location' => 'query', 'type' => 'string', ), ), ),'patch' => array( 'path' => 'v1/datasets/{datasetId}', 'httpMethod' => 'PATCH', 'parameters' => array( 'datasetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ),'setIamPolicy' => array( 'path' => 'v1/{+resource}:setIamPolicy', 'httpMethod' => 'POST', 'parameters' => array( 'resource' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'testIamPermissions' => array( 'path' => 'v1/{+resource}:testIamPermissions', 'httpMethod' => 'POST', 'parameters' => array( 'resource' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'undelete' => array( 'path' => 'v1/datasets/{datasetId}:undelete', 'httpMethod' => 'POST', 'parameters' => array( 'datasetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ), ) ) ); $this->operations = new Google_Service_Genomics_Resource_Operations( $this, $this->serviceName, 'operations', array( 'methods' => array( 'cancel' => array( 'path' => 'v1/{+name}:cancel', 'httpMethod' => 'POST', 'parameters' => array( 'name' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/{+name}', 'httpMethod' => 'GET', 'parameters' => array( 'name' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'list' => array( 'path' => 'v1/{+name}', 'httpMethod' => 'GET', 'parameters' => array( 'name' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'filter' => array( 'location' => 'query', 'type' => 'string', ), 'pageToken' => array( 'location' => 'query', 'type' => 'string', ), 'pageSize' => array( 'location' => 'query', 'type' => 'integer', ), ), ), ) ) ); $this->readgroupsets = new Google_Service_Genomics_Resource_Readgroupsets( $this, $this->serviceName, 'readgroupsets', array( 'methods' => array( 'delete' => array( 'path' => 'v1/readgroupsets/{readGroupSetId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'readGroupSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'export' => array( 'path' => 'v1/readgroupsets/{readGroupSetId}:export', 'httpMethod' => 'POST', 'parameters' => array( 'readGroupSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/readgroupsets/{readGroupSetId}', 'httpMethod' => 'GET', 'parameters' => array( 'readGroupSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'import' => array( 'path' => 'v1/readgroupsets:import', 'httpMethod' => 'POST', 'parameters' => array(), ),'patch' => array( 'path' => 'v1/readgroupsets/{readGroupSetId}', 'httpMethod' => 'PATCH', 'parameters' => array( 'readGroupSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ),'search' => array( 'path' => 'v1/readgroupsets/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); $this->readgroupsets_coveragebuckets = new Google_Service_Genomics_Resource_ReadgroupsetsCoveragebuckets( $this, $this->serviceName, 'coveragebuckets', array( 'methods' => array( 'list' => array( 'path' => 'v1/readgroupsets/{readGroupSetId}/coveragebuckets', 'httpMethod' => 'GET', 'parameters' => array( 'readGroupSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'targetBucketWidth' => array( 'location' => 'query', 'type' => 'string', ), 'referenceName' => array( 'location' => 'query', 'type' => 'string', ), 'end' => array( 'location' => 'query', 'type' => 'string', ), 'pageToken' => array( 'location' => 'query', 'type' => 'string', ), 'pageSize' => array( 'location' => 'query', 'type' => 'integer', ), 'start' => array( 'location' => 'query', 'type' => 'string', ), ), ), ) ) ); $this->reads = new Google_Service_Genomics_Resource_Reads( $this, $this->serviceName, 'reads', array( 'methods' => array( 'search' => array( 'path' => 'v1/reads/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); $this->references = new Google_Service_Genomics_Resource_References( $this, $this->serviceName, 'references', array( 'methods' => array( 'get' => array( 'path' => 'v1/references/{referenceId}', 'httpMethod' => 'GET', 'parameters' => array( 'referenceId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'search' => array( 'path' => 'v1/references/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); $this->references_bases = new Google_Service_Genomics_Resource_ReferencesBases( $this, $this->serviceName, 'bases', array( 'methods' => array( 'list' => array( 'path' => 'v1/references/{referenceId}/bases', 'httpMethod' => 'GET', 'parameters' => array( 'referenceId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'end' => array( 'location' => 'query', 'type' => 'string', ), 'pageToken' => array( 'location' => 'query', 'type' => 'string', ), 'pageSize' => array( 'location' => 'query', 'type' => 'integer', ), 'start' => array( 'location' => 'query', 'type' => 'string', ), ), ), ) ) ); $this->referencesets = new Google_Service_Genomics_Resource_Referencesets( $this, $this->serviceName, 'referencesets', array( 'methods' => array( 'get' => array( 'path' => 'v1/referencesets/{referenceSetId}', 'httpMethod' => 'GET', 'parameters' => array( 'referenceSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'search' => array( 'path' => 'v1/referencesets/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); $this->variants = new Google_Service_Genomics_Resource_Variants( $this, $this->serviceName, 'variants', array( 'methods' => array( 'create' => array( 'path' => 'v1/variants', 'httpMethod' => 'POST', 'parameters' => array(), ),'delete' => array( 'path' => 'v1/variants/{variantId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'variantId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/variants/{variantId}', 'httpMethod' => 'GET', 'parameters' => array( 'variantId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'import' => array( 'path' => 'v1/variants:import', 'httpMethod' => 'POST', 'parameters' => array(), ),'merge' => array( 'path' => 'v1/variants:merge', 'httpMethod' => 'POST', 'parameters' => array(), ),'patch' => array( 'path' => 'v1/variants/{variantId}', 'httpMethod' => 'PATCH', 'parameters' => array( 'variantId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ),'search' => array( 'path' => 'v1/variants/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); $this->variantsets = new Google_Service_Genomics_Resource_Variantsets( $this, $this->serviceName, 'variantsets', array( 'methods' => array( 'create' => array( 'path' => 'v1/variantsets', 'httpMethod' => 'POST', 'parameters' => array(), ),'delete' => array( 'path' => 'v1/variantsets/{variantSetId}', 'httpMethod' => 'DELETE', 'parameters' => array( 'variantSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'export' => array( 'path' => 'v1/variantsets/{variantSetId}:export', 'httpMethod' => 'POST', 'parameters' => array( 'variantSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'get' => array( 'path' => 'v1/variantsets/{variantSetId}', 'httpMethod' => 'GET', 'parameters' => array( 'variantSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), ), ),'patch' => array( 'path' => 'v1/variantsets/{variantSetId}', 'httpMethod' => 'PATCH', 'parameters' => array( 'variantSetId' => array( 'location' => 'path', 'type' => 'string', 'required' => true, ), 'updateMask' => array( 'location' => 'query', 'type' => 'string', ), ), ),'search' => array( 'path' => 'v1/variantsets/search', 'httpMethod' => 'POST', 'parameters' => array(), ), ) ) ); } }